BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C12LP1|AL430206
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1661 1820 0.0
>3x_Contig1661
Length = 14612
Score = 1820 bits (917), Expect = 0.0
Identities = 929/933 (99%), Gaps = 1/933 (0%)
Strand = Plus / Minus
Query: 1 agcggcatcggcagcgc-agtaccggcccaggcccctgcgtccacgttcctaccctttat 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4333 agcggcatcggcagcgccagtaccggcccaggcccctgcgtccacgttcctaccctttat 4274
Query: 60 caatgatactttccataaattcccaaactatatccatgaccaagtgtatctaggtaattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4273 caatgatactttccataaattcccaaactatatccatgaccaagtgtatctaggtaattt 4214
Query: 120 cacctggaattcgatcgtyaaccataataaatctcagttgaagtctttccagtatacaag 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4213 cacctggaattcgatcgtcaaccataataaatctcagttgaagtctttccagtatacaag 4154
Query: 180 gtctatcgtacaggacccggttctatcgtaccttaaccgacatttcccactttcaccgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4153 gtctatcgtacaggacccggttctatcgtaccttaaccgacatttcccactttcaccgag 4094
Query: 240 cggtgtaccgattaatatccccttatctgctgaggatgtwatacgattaattgataagta 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4093 cggtgtaccgattaatatccccttatctgctgaggatgtaatacgattaattgataagta 4034
Query: 300 cttgaactcgaaccaaatcttcccatatctcttggggacgtcatggcaccaacgaatgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4033 cttgaactcgaaccaaatcttcccatatctcttggggacgtcatggcaccaacgaatgat 3974
Query: 360 ctcggtactaaccgggacttcgactgtttctgaccctgcggtgtccattgtactaatact 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3973 ctcggtactaaccgggacttcgactgtctctgaccctgcggtgtccattgtactaatact 3914
Query: 420 tatagtacagttcgagttgaattgtttcaataacgagacgattttccaggcggttaaact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3913 tatagtacagttcgagttgaattgtttcaataacgagacgattttccaggcggttaaact 3854
Query: 480 tttgggttccttgtcgcaggacaaattatcatcgattcaactgatgaatttcggaatacg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3853 tttgggttccttgtcgcaggacaaattatcatcgattcaactgatgaatttcggaatacg 3794
Query: 540 gtatttcatgtcccaggagaacccatactctgtcatttggactaacgatttgattaattt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3793 gtatttcatgtcccaggagaacccatactctgtcatttggactaacgatttgattaattt 3734
Query: 600 caaccagtatatgatcatcaattcagctttgttcttgaattacaacaatcttgttggaca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3733 caaccagtatatgatcatcaattcagctttgttcttgaattacaacaatcttgttggaca 3674
Query: 660 tgaaaactcaacgtcaaaggttattaggcttctcacgttttatcaattccaagtgttcca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3673 tgaaaactcaacgtcaaaggttattaggcttctcacgttttatcaattccaagtgttcca 3614
Query: 720 gatctggtggtgtttcatcaacggattacctaagactaatttcttaatcgatgaattcca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 gatctggtggtgtttcatcaacggattacctaagactaatttcttaatcgatgaattcca 3554
Query: 780 tccaccaaccatttcagagttcccacctcatttgaagatgttccaactcatttatgattt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3553 tccaccaaccatttcagagttcccacctcatttgaagatgttccaactcatttatgattt 3494
Query: 840 catattgcaattggatggttgtcaccttcaattattagctaatgagactaacaataaata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3493 catattgcaattggatggttgtcaccttcaattattagctaatgagactaacaataaata 3434
Query: 900 tcagctgttgatagaatccttcggttacaaatt 932
|||||||||||||||||||||||||||||||||
Sbjct: 3433 tcagctgttgatagaatccttcggttacaaatt 3401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6540
Number of Sequences: 1807
Number of extensions: 6540
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)